We got the grant!

On August 5, the COMPADRE/COMADRE team was awarded an NSF grant to further develop our matrix databases. The funded project, “An Open-Access Global Repository of Plant and Animal Demographic Data”, will be led by Judy Che-Castaldo at Lincoln Park Zoo in Chicago, IL. This funding comes from the Advances in Biological Informatics program and will increase the function of the database and make it more user-friendly.

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Celebrating our grant success at the ESA meeting in Portland, OR

There are three main parts to the funded project. In the first part, we will finish transferring our data into a relational database, which will run more efficiently and be less error-prone than our old system of spreadsheets. A second part will be to build a data-entry portal that our digitization team will use, so that the data input will be consistent across our digitization nodes around the world. Down the line, this portal will be opened to other researchers who can then contribute their own matrix data. The third part of the project will be to refresh our database website to make it more accessible to a wide range of users, including researchers, teachers, students, and conservation managers.

In addition to improvements to the database itself, we will also be bringing on board a project coordinator who will oversee data digitization and communication across all of our participating nodes. Together, we will develop educational materials and hold user engagement workshops at several scientific conferences each year to spread the word and encourage even greater use of our demographic matrix data for research and in classrooms.

We are so excited about this next step in the COMPADRE/COMADRE project! We hope you will follow along and give us your feedback as we continue to make our databases better and more useful for you.

By Judy Che-Castaldo

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Our upcoming workshop in Portland, OR

Over the last few years we have run numerous workshops on using the COMPADRE Plant Matrix Database and COMADRE Animal Matrix Database, and on matrix population models (MPMs) more generally.

Where better to run our next workshop than the upcoming Ecological Society of America (ESA) meeting in Portland, Oregon?

This yearly conference brings together academics, students, and practitioners for a few days of talks and workshops on ecology and allied fields. Attendance is in the thousands — the last time it was in Portland (2012) the meeting drew an amazing crowd of 5000! Although not all attendees will have an interest in MPMs (shame!), there are sure to be more than a handful who’d like to know more.

To help with this, this year we are running a half-day workshop entitled “Introduction to Matrix Population Models and Comparative Population Biology Using the COM(P)ADRE Matrix Databases“.

Drawing from experience garnered over the last few years we will take attendees on a five hour journey from the very basics of matrix modelling to comparative MPM analysis using R. The expert instructors are drawn from the COM(P)ADRE committees and include Owen Jones (Uni Southern Denmark), Roberto Salguero-Gomez (Uni Oxford), Judy Che-Castaldo (Lincoln Park Zoo) and Iain Stott (Uni Southern Denmark).

ESA 2017 attendees were given an opportunity to book for the workshop when they registered for the main conference. However, it should be possible to register as a last minute attendee on-site.

If you can’t make it this time, rest assured that we will continue to run similar workshops regularly at relevant meetings/conferences. We also run them on request: We blogged about one of those here.

Here’s looking forward to some matrix modeling fun in a few days!